STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opp-3EABC superfamily ATP binding cassette transporter, ABC protein. (211 aa)    
Predicted Functional Partners:
opp-1D_1
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein.
 
 
0.998
opp-1D_2
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein.
 
  0.998
opp-2C_1
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.988
opp-1A_1
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
 
 
 0.985
opp-2B_1
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
 0.985
opp-2C_2
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.951
opp-2B_2
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
 0.936
oppD
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
   
0.930
AKC75196.1
ABC transporter ATP-binding protein.
 
    
0.915
vraD
SalX, ABC-type antimicrobial peptide transport system, involved in vancomycin resistance.
 
    
0.815
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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