Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKC75066.1 | AKC75068.1 | ShL2_00180 | ShL2_00182 | Hypothetical protein. | Macro domain protein. | 0.988 |
AKC75066.1 | AKC75069.1 | ShL2_00180 | ShL2_00183 | Hypothetical protein. | Glycine cleavage system H protein. | 0.944 |
AKC75066.1 | AKC75070.1 | ShL2_00180 | ShL2_00184 | Hypothetical protein. | Luciferase-like monooxygenase. | 0.656 |
AKC75066.1 | AKC75071.1 | ShL2_00180 | ShL2_00185 | Hypothetical protein. | Flavin oxidoreductase. | 0.865 |
AKC75066.1 | lplA1 | ShL2_00180 | ShL2_00179 | Hypothetical protein. | Lipoyltransferase and lipoate-protein ligase. | 0.940 |
AKC75068.1 | AKC75066.1 | ShL2_00182 | ShL2_00180 | Macro domain protein. | Hypothetical protein. | 0.988 |
AKC75068.1 | AKC75069.1 | ShL2_00182 | ShL2_00183 | Macro domain protein. | Glycine cleavage system H protein. | 0.913 |
AKC75068.1 | AKC75070.1 | ShL2_00182 | ShL2_00184 | Macro domain protein. | Luciferase-like monooxygenase. | 0.956 |
AKC75068.1 | AKC75071.1 | ShL2_00182 | ShL2_00185 | Macro domain protein. | Flavin oxidoreductase. | 0.605 |
AKC75068.1 | gcvH | ShL2_00182 | ShL2_01907 | Macro domain protein. | Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family. | 0.841 |
AKC75068.1 | lipM | ShL2_00182 | ShL2_01267 | Macro domain protein. | Lipoate-protein ligase A family protein; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation. | 0.840 |
AKC75068.1 | lplA1 | ShL2_00182 | ShL2_00179 | Macro domain protein. | Lipoyltransferase and lipoate-protein ligase. | 0.973 |
AKC75068.1 | lplA2 | ShL2_00182 | ShL2_02198 | Macro domain protein. | Lipoate-protein ligase A family protein; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.845 |
AKC75069.1 | AKC75066.1 | ShL2_00183 | ShL2_00180 | Glycine cleavage system H protein. | Hypothetical protein. | 0.944 |
AKC75069.1 | AKC75068.1 | ShL2_00183 | ShL2_00182 | Glycine cleavage system H protein. | Macro domain protein. | 0.913 |
AKC75069.1 | AKC75070.1 | ShL2_00183 | ShL2_00184 | Glycine cleavage system H protein. | Luciferase-like monooxygenase. | 0.817 |
AKC75069.1 | AKC75071.1 | ShL2_00183 | ShL2_00185 | Glycine cleavage system H protein. | Flavin oxidoreductase. | 0.831 |
AKC75069.1 | gcvH | ShL2_00183 | ShL2_01907 | Glycine cleavage system H protein. | Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family. | 0.906 |
AKC75069.1 | lipM | ShL2_00183 | ShL2_01267 | Glycine cleavage system H protein. | Lipoate-protein ligase A family protein; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation. | 0.645 |
AKC75069.1 | lplA1 | ShL2_00183 | ShL2_00179 | Glycine cleavage system H protein. | Lipoyltransferase and lipoate-protein ligase. | 0.942 |
page 1 of 4