STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capCCapsule biosynthesis protein CapC. (150 aa)    
Predicted Functional Partners:
capB
Capsule biosynthesis protein CapB.
 
   
 0.994
capA_2
Capsule biosynthesis protein CapA.
 
  
 0.967
ggt
Gamma-glutamyltranspeptidase.
 
   
 0.963
AKC75309.1
Hypothetical protein.
       0.849
capD
NAD dependent epimerase/dehydratase family protein.
      
 0.744
AKC76412.1
Hypothetical protein.
 
   
 0.663
AKC76781.1
Hypothetical protein.
 
     0.658
icaC
Intercellular adhesion protein icaC.
  
     0.650
gltB2
Glutamate synthase-ferredoxin large subunit; Belongs to the glutamate synthase family.
      
 0.597
gcvT
Aminomethyltransferase (glycine cleavage system T protein); The glycine cleavage system catalyzes the degradation of glycine.
      
 0.448
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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