Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKC75400.1 | bcr | ShL2_00526 | ShL2_00528 | SAM dependent methyltransferase. | MFS family major facilitator transporter, bicyclomycin:cation symporter. | 0.400 |
| AKC75400.1 | scdA | ShL2_00526 | ShL2_00527 | SAM dependent methyltransferase. | Cell division and morphogenesis-related protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions. | 0.774 |
| AKC76621.1 | qoxC | ShL2_01764 | ShL2_01768 | Nitric oxide dioxygenase; Belongs to the globin family. | Cytochrome aa3 quinol oxidase, subunit III. | 0.583 |
| AKC76621.1 | scdA | ShL2_01764 | ShL2_00527 | Nitric oxide dioxygenase; Belongs to the globin family. | Cell division and morphogenesis-related protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions. | 0.974 |
| bcr | AKC75400.1 | ShL2_00528 | ShL2_00526 | MFS family major facilitator transporter, bicyclomycin:cation symporter. | SAM dependent methyltransferase. | 0.400 |
| bcr | scdA | ShL2_00528 | ShL2_00527 | MFS family major facilitator transporter, bicyclomycin:cation symporter. | Cell division and morphogenesis-related protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions. | 0.418 |
| ctaB | lpdA | ShL2_01706 | ShL2_01281 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | Dihydrolipoamide dehydrogenase. | 0.404 |
| ctaB | pdhD_4 | ShL2_01706 | ShL2_01727 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | 0.404 |
| ctaB | qoxC | ShL2_01706 | ShL2_01768 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | Cytochrome aa3 quinol oxidase, subunit III. | 0.996 |
| ctaB | scdA | ShL2_01706 | ShL2_00527 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | Cell division and morphogenesis-related protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions. | 0.400 |
| lpdA | ctaB | ShL2_01281 | ShL2_01706 | Dihydrolipoamide dehydrogenase. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.404 |
| lpdA | pdhD_4 | ShL2_01281 | ShL2_01727 | Dihydrolipoamide dehydrogenase. | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | 0.917 |
| lpdA | scdA | ShL2_01281 | ShL2_00527 | Dihydrolipoamide dehydrogenase. | Cell division and morphogenesis-related protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions. | 0.407 |
| pdhD_4 | ctaB | ShL2_01727 | ShL2_01706 | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.404 |
| pdhD_4 | lpdA | ShL2_01727 | ShL2_01281 | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | Dihydrolipoamide dehydrogenase. | 0.917 |
| pdhD_4 | scdA | ShL2_01727 | ShL2_00527 | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | Cell division and morphogenesis-related protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions. | 0.407 |
| qoxC | AKC76621.1 | ShL2_01768 | ShL2_01764 | Cytochrome aa3 quinol oxidase, subunit III. | Nitric oxide dioxygenase; Belongs to the globin family. | 0.583 |
| qoxC | ctaB | ShL2_01768 | ShL2_01706 | Cytochrome aa3 quinol oxidase, subunit III. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.996 |
| qoxC | scdA | ShL2_01768 | ShL2_00527 | Cytochrome aa3 quinol oxidase, subunit III. | Cell division and morphogenesis-related protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions. | 0.423 |
| scdA | AKC75400.1 | ShL2_00527 | ShL2_00526 | Cell division and morphogenesis-related protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions. | SAM dependent methyltransferase. | 0.774 |
page 1 of 2