Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gtrAGtrA-like integral membrane protein. (126 aa)    
Predicted Functional Partners:
yfhO
Membrane protein YfhO.
 
   
 0.840
pepA2
M42 family glutamyl aminopeptidase.
      
 0.819
AKC76891.1
Undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase.
 
  
 0.791
AKC75405.1
Hypothetical protein.
       0.776
pepA1
M42 family glutamyl aminopeptidase.
      
 0.580
bcr
MFS family major facilitator transporter, bicyclomycin:cation symporter.
 
     0.579
AKC75871.1
Membrane protein.
  
     0.577
glxK
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
       0.555
AKC75407.1
Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.536
AKC76938.1
Hypothetical protein.
 
     0.536
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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