STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC75423.1Formate/nitrite transporter family protein. (273 aa)    
Predicted Functional Partners:
nirD
Nitrite reductase small subunit.
  
  
 0.727
nirB
Nitrite reductase, large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.690
nasF_2
Tetrapyrrole (corrin/porphyrin) methylase familyprotein; Belongs to the precorrin methyltransferase family.
 
  
 0.566
cbiX
Sirohydrochlorin cobalt chelatase.
       0.484
AKC75422.1
Hypothetical protein.
       0.482
gltB
Glutamate synthase (NADPH), large subunit.
   
  
 0.424
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.