STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC75865.1Hypothetical protein; Belongs to the UPF0342 family. (114 aa)    
Predicted Functional Partners:
AKC75864.1
Hypothetical protein; Belongs to the UPF0754 family.
 
     0.834
AKC75863.1
Transcriptional regulator.
 
     0.739
AKC75867.1
Hypothetical protein.
 
     0.707
AKC75866.1
Calcineurin-like phosphoesterase.
 
     0.687
AKC76409.1
Hypothetical protein; Belongs to the UPF0342 family.
    
 
 0.574
AKC76302.1
Hypothetical protein.
  
    0.543
yhaM
3'-5' exoribonuclease YhaM.
  
    0.532
camS
Pheromone lipoprotein CamS.
  
     0.520
AKC75961.1
Adenine-specific DNA methylase-like protein.
  
     0.485
rpoE
DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
     0.438
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.