STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scpAChromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (243 aa)    
Predicted Functional Partners:
scpB
Transcriptional regulators (Ypuh-like); Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
 0.999
smc
SMC superfamily ATP-binding chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 0.981
rluB
Ribosomal large subunit pseudouridine synthase B, RluB; Belongs to the pseudouridine synthase RsuA family.
 
  
 0.941
AKC76168.1
Hypothetical protein.
     
 0.808
srrA_2
Winged helix family two component transcriptional regulator.
       0.773
srrB_2
Integral membrane sensor signal transduction histidine kinase.
       0.773
AKC76216.1
Extracellular matrix binding protein.
  
 
 0.619
clfB
Clumping factor B.
   
  
 0.616
cmk
Cytidylate kinase.
 
  
 0.614
sigB
RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
     
 0.596
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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