Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKC76606.1 | ecfT | ShL2_01749 | ShL2_00730 | Cobalt ABC transporter permease. | Cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.476 |
| AKC76606.1 | tenA | ShL2_01749 | ShL2_00831 | Cobalt ABC transporter permease. | Thiaminase-2; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.470 |
| AKC76606.1 | thiG | ShL2_01749 | ShL2_00457 | Cobalt ABC transporter permease. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.456 |
| AKC76606.1 | thiS | ShL2_01749 | ShL2_00458 | Cobalt ABC transporter permease. | Sulfur carrier protein ThiS. | 0.505 |
| AKC76606.1 | ykoC | ShL2_01749 | ShL2_01751 | Cobalt ABC transporter permease. | ABC superfamily ATP binding cassette transporter, membrane protein. | 0.981 |
| AKC76606.1 | ykoD | ShL2_01749 | ShL2_01750 | Cobalt ABC transporter permease. | ABC superfamily ATP binding cassette transporter, ABC protein. | 0.984 |
| ecfT | AKC76606.1 | ShL2_00730 | ShL2_01749 | Cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | Cobalt ABC transporter permease. | 0.476 |
| ecfT | ykoC | ShL2_00730 | ShL2_01751 | Cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | ABC superfamily ATP binding cassette transporter, membrane protein. | 0.908 |
| ecfT | ykoD | ShL2_00730 | ShL2_01750 | Cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | ABC superfamily ATP binding cassette transporter, ABC protein. | 0.972 |
| tenA | AKC76606.1 | ShL2_00831 | ShL2_01749 | Thiaminase-2; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | Cobalt ABC transporter permease. | 0.470 |
| tenA | thiG | ShL2_00831 | ShL2_00457 | Thiaminase-2; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.575 |
| tenA | thiS | ShL2_00831 | ShL2_00458 | Thiaminase-2; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | Sulfur carrier protein ThiS. | 0.516 |
| thiG | AKC76606.1 | ShL2_00457 | ShL2_01749 | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Cobalt ABC transporter permease. | 0.456 |
| thiG | tenA | ShL2_00457 | ShL2_00831 | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Thiaminase-2; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.575 |
| thiG | thiS | ShL2_00457 | ShL2_00458 | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Sulfur carrier protein ThiS. | 0.999 |
| thiS | AKC76606.1 | ShL2_00458 | ShL2_01749 | Sulfur carrier protein ThiS. | Cobalt ABC transporter permease. | 0.505 |
| thiS | tenA | ShL2_00458 | ShL2_00831 | Sulfur carrier protein ThiS. | Thiaminase-2; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.516 |
| thiS | thiG | ShL2_00458 | ShL2_00457 | Sulfur carrier protein ThiS. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.999 |
| ykoC | AKC76606.1 | ShL2_01751 | ShL2_01749 | ABC superfamily ATP binding cassette transporter, membrane protein. | Cobalt ABC transporter permease. | 0.981 |
| ykoC | ecfT | ShL2_01751 | ShL2_00730 | ABC superfamily ATP binding cassette transporter, membrane protein. | Cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.908 |
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