Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKC76428.1 | AKC76429.1 | ShL2_01568 | ShL2_01569 | Zinc-dependent peptidase, M16 family. | Processing proteinase-like protein, pqqL. | 0.964 |
| AKC76428.1 | qoxA | ShL2_01568 | ShL2_01766 | Zinc-dependent peptidase, M16 family. | Quinol oxidase polypeptide II precursor; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | 0.714 |
| AKC76428.1 | qoxB | ShL2_01568 | ShL2_01767 | Zinc-dependent peptidase, M16 family. | Cytochrome aa3 quinol oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.707 |
| AKC76428.1 | qoxC | ShL2_01568 | ShL2_01768 | Zinc-dependent peptidase, M16 family. | Cytochrome aa3 quinol oxidase, subunit III. | 0.697 |
| AKC76428.1 | sdhA | ShL2_01568 | ShL2_01683 | Zinc-dependent peptidase, M16 family. | Succinate dehydrogenase flavoprotein subunit. | 0.504 |
| AKC76428.1 | sdhB | ShL2_01568 | ShL2_01682 | Zinc-dependent peptidase, M16 family. | Succinate dehydrogenase iron-sulfur protein. | 0.556 |
| AKC76429.1 | AKC76428.1 | ShL2_01569 | ShL2_01568 | Processing proteinase-like protein, pqqL. | Zinc-dependent peptidase, M16 family. | 0.964 |
| AKC76429.1 | qoxA | ShL2_01569 | ShL2_01766 | Processing proteinase-like protein, pqqL. | Quinol oxidase polypeptide II precursor; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | 0.714 |
| AKC76429.1 | qoxB | ShL2_01569 | ShL2_01767 | Processing proteinase-like protein, pqqL. | Cytochrome aa3 quinol oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.707 |
| AKC76429.1 | qoxC | ShL2_01569 | ShL2_01768 | Processing proteinase-like protein, pqqL. | Cytochrome aa3 quinol oxidase, subunit III. | 0.697 |
| AKC76429.1 | sdhA | ShL2_01569 | ShL2_01683 | Processing proteinase-like protein, pqqL. | Succinate dehydrogenase flavoprotein subunit. | 0.504 |
| AKC76429.1 | sdhB | ShL2_01569 | ShL2_01682 | Processing proteinase-like protein, pqqL. | Succinate dehydrogenase iron-sulfur protein. | 0.556 |
| atpA_1 | atpC | ShL2_00817 | ShL2_00818 | ATP synthase subunit alpha, AtpA_1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | ATP synthase subunit C, AtpC; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpA_1 | qoxA | ShL2_00817 | ShL2_01766 | ATP synthase subunit alpha, AtpA_1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Quinol oxidase polypeptide II precursor; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | 0.846 |
| atpA_1 | qoxB | ShL2_00817 | ShL2_01767 | ATP synthase subunit alpha, AtpA_1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome aa3 quinol oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.839 |
| atpA_1 | qoxC | ShL2_00817 | ShL2_01768 | ATP synthase subunit alpha, AtpA_1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome aa3 quinol oxidase, subunit III. | 0.975 |
| atpC | atpA_1 | ShL2_00818 | ShL2_00817 | ATP synthase subunit C, AtpC; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | ATP synthase subunit alpha, AtpA_1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.999 |
| atpC | qoxA | ShL2_00818 | ShL2_01766 | ATP synthase subunit C, AtpC; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Quinol oxidase polypeptide II precursor; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | 0.433 |
| atpC | qoxB | ShL2_00818 | ShL2_01767 | ATP synthase subunit C, AtpC; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Cytochrome aa3 quinol oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.434 |
| atpC | qoxC | ShL2_00818 | ShL2_01768 | ATP synthase subunit C, AtpC; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Cytochrome aa3 quinol oxidase, subunit III. | 0.836 |
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