STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC76634.1Tryptophan-rich transmembrane signaling protein. (146 aa)    
Predicted Functional Partners:
crtI
Phytoene desaturase.
 
  
 0.746
repB
Replication protein RepB.
      
 0.741
crtN
Dehydrosqualene desaturase.
 
  
 0.606
AKC76512.1
Cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein.
  
    0.600
AKC75270.1
Glycosyl transferase family protein.
  
  
 0.594
ftsK
DNA translocase FtsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family.
      
 0.590
phrB
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
  
 0.589
ompR
Response regulator OmpR.
   
  
 0.563
AKC76635.1
Acetyltransferase.
       0.462
AKC76633.1
MarR family transcriptional regulator.
       0.453
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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