STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydjZTVP38/TMEM64 family inner membrane protein YdjZ. (190 aa)    
Predicted Functional Partners:
lepB
Sec family Type I general secretory pathway S26 family signal peptidase I, LepB.
  
  
 0.884
lepB-2
Sec family Type I general secretory pathway S26 family signal peptidase I.
  
  
 0.806
AKC76243.1
Hypothetical protein.
  
     0.755
AKC75876.1
RNAIII-activating protein TRAP.
 
     0.738
addB
ATP-dependent nuclease subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.
 
     0.667
comK
Competence transcription factor ComK.
 
     0.659
AKC76558.1
Hypothetical protein.
  
     0.621
AKC75930.1
Hypothetical protein; Belongs to the UPF0354 family.
  
     0.617
addA
ATP-dependent nuclease subunit A; ATP-dependent DNA helicase.
 
     0.610
AKC77068.1
Hypothetical protein.
 
     0.569
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.