STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufBABC superfamily ATP binding cassette transporter, membrane protein. (465 aa)    
Predicted Functional Partners:
sufC
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 0.999
sufS
Cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.997
iscU
SUF system FeS assembly protein.
 
  
 0.976
sufD
ABC superfamily ATP binding cassette transporter, membrane protein.
 
  
0.968
nifU
Fe-S cluster assembly protein.
      
 0.747
sufA
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
 
 0.578
paaD
Metal-sulfur cluster biosynthetic enzyme, PaaD.
 
   
 0.494
ahpC
Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.484
nifS
Cysteine desulfurase, NifS.
 
  
 0.480
AKC76748.1
Hypothetical protein.
       0.441
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.