Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
dhaMDihydroxyacetone kinase, phosphotransfer subunit. (126 aa)    
Predicted Functional Partners:
dhaL
Dihydroxyacetone kinase, DhaL subunit.
 
 0.999
AKC76945.1
Dihydroxyacetone kinase family protein.
 
 0.999
glpD
DNA-directed DNA polymerase III subunit gamma and tau; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.827
gpsA
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
  0.800
AKC77233.1
Transcriptional repressor.
      
 0.795
comGC
Competence protein ComGC-like protein; Required for transformation and DNA binding.
      
 0.791
nrgA
AMT family ammonium or ammonia transporter.
      
 0.781
tyrA
Prephenate dehydrogenase.
      
 0.696
AKC76942.1
Hypothetical protein.
       0.687
pstS
Phosphate ABC transporter periplasmic protein.
      
 0.580
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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