STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
betIHTH-type transcriptional regulator BetI. (193 aa)    
Predicted Functional Partners:
AKC77007.1
Hypothetical protein.
 
     0.944
opuCD
Glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, membrane protein.
      
 0.692
opuCA
Glycine betaine/choline ABC superfamily ATP binding cassette transporter, ABC protein.
      
 0.621
AKC77013.1
MarR family protein.
  
     0.617
rpmE2
50S ribosomal protein L31.
  
  
 0.600
cudT
Choline/carnitine/betaine transporter, BCCT family; Belongs to the BCCT transporter (TC 2.A.15) family.
   
  
 0.594
AKC77009.1
Hypothetical protein.
  
    0.499
AKC75558.1
RND superfamily resistance-nodulation-cell division acriflavin:proton (H+) antiporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.405
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.