Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fni | mvaA | ShL2_00612 | ShL2_00409 | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family. | 0.863 |
| fni | mvaD | ShL2_00612 | ShL2_02196 | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Mevalonate diphosphate decarboxylase. | 0.982 |
| fni | mvaK1 | ShL2_00612 | ShL2_02197 | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Mevalonate kinase. | 0.843 |
| fni | mvaK2_1 | ShL2_00612 | ShL2_02194 | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Phosphomevalonate kinase. | 0.964 |
| fni | mvaK2_2 | ShL2_00612 | ShL2_02195 | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Phosphomevalonate kinase. | 0.967 |
| fni | mvaS | ShL2_00612 | ShL2_00407 | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 3-hydroxy-3-methylglutaryl coenzyme A synthase. | 0.879 |
| mvaA | fni | ShL2_00409 | ShL2_00612 | hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.863 |
| mvaA | mvaD | ShL2_00409 | ShL2_02196 | hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family. | Mevalonate diphosphate decarboxylase. | 0.967 |
| mvaA | mvaK1 | ShL2_00409 | ShL2_02197 | hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family. | Mevalonate kinase. | 0.999 |
| mvaA | mvaK2_1 | ShL2_00409 | ShL2_02194 | hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family. | Phosphomevalonate kinase. | 0.680 |
| mvaA | mvaK2_2 | ShL2_00409 | ShL2_02195 | hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family. | Phosphomevalonate kinase. | 0.698 |
| mvaA | mvaS | ShL2_00409 | ShL2_00407 | hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family. | 3-hydroxy-3-methylglutaryl coenzyme A synthase. | 0.998 |
| mvaD | fni | ShL2_02196 | ShL2_00612 | Mevalonate diphosphate decarboxylase. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.982 |
| mvaD | mvaA | ShL2_02196 | ShL2_00409 | Mevalonate diphosphate decarboxylase. | hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family. | 0.967 |
| mvaD | mvaK1 | ShL2_02196 | ShL2_02197 | Mevalonate diphosphate decarboxylase. | Mevalonate kinase. | 0.998 |
| mvaD | mvaK2_1 | ShL2_02196 | ShL2_02194 | Mevalonate diphosphate decarboxylase. | Phosphomevalonate kinase. | 0.973 |
| mvaD | mvaK2_2 | ShL2_02196 | ShL2_02195 | Mevalonate diphosphate decarboxylase. | Phosphomevalonate kinase. | 0.997 |
| mvaD | mvaS | ShL2_02196 | ShL2_00407 | Mevalonate diphosphate decarboxylase. | 3-hydroxy-3-methylglutaryl coenzyme A synthase. | 0.947 |
| mvaK1 | fni | ShL2_02197 | ShL2_00612 | Mevalonate kinase. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.843 |
| mvaK1 | mvaA | ShL2_02197 | ShL2_00409 | Mevalonate kinase. | hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family. | 0.999 |
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