Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKC77139.1 | AKC77141.1 | ShL2_02288 | ShL2_02290 | Polyribonucleotide nucleotidyltransferase. | RNA-binding S4 domain-containing heat shock protein. | 0.769 |
| AKC77139.1 | AKC77143.1 | ShL2_02288 | ShL2_02292 | Polyribonucleotide nucleotidyltransferase. | MOP superfamily PST family polysaccharide transporter. | 0.826 |
| AKC77139.1 | divIC | ShL2_02288 | ShL2_02289 | Polyribonucleotide nucleotidyltransferase. | Cell-division initiation protein. | 0.844 |
| AKC77139.1 | ftsH | ShL2_02288 | ShL2_02285 | Polyribonucleotide nucleotidyltransferase. | Cell-division protein (ATP-dependent Zn metallopeptidase); Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.684 |
| AKC77139.1 | hpt | ShL2_02288 | ShL2_02286 | Polyribonucleotide nucleotidyltransferase. | Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.764 |
| AKC77139.1 | hslO | ShL2_02288 | ShL2_02284 | Polyribonucleotide nucleotidyltransferase. | Redox regulated Hsp33-like chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress. | 0.439 |
| AKC77139.1 | mazG_2 | ShL2_02288 | ShL2_02291 | Polyribonucleotide nucleotidyltransferase. | Nucleoside triphosphate pyrophosphohydrolase. | 0.769 |
| AKC77139.1 | mfd | ShL2_02288 | ShL2_02293 | Polyribonucleotide nucleotidyltransferase. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.810 |
| AKC77139.1 | pth | ShL2_02288 | ShL2_02294 | Polyribonucleotide nucleotidyltransferase. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.769 |
| AKC77139.1 | tilS | ShL2_02288 | ShL2_02287 | Polyribonucleotide nucleotidyltransferase. | tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. | 0.771 |
| AKC77141.1 | AKC77139.1 | ShL2_02290 | ShL2_02288 | RNA-binding S4 domain-containing heat shock protein. | Polyribonucleotide nucleotidyltransferase. | 0.769 |
| AKC77141.1 | AKC77143.1 | ShL2_02290 | ShL2_02292 | RNA-binding S4 domain-containing heat shock protein. | MOP superfamily PST family polysaccharide transporter. | 0.894 |
| AKC77141.1 | divIC | ShL2_02290 | ShL2_02289 | RNA-binding S4 domain-containing heat shock protein. | Cell-division initiation protein. | 0.860 |
| AKC77141.1 | ftsH | ShL2_02290 | ShL2_02285 | RNA-binding S4 domain-containing heat shock protein. | Cell-division protein (ATP-dependent Zn metallopeptidase); Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.677 |
| AKC77141.1 | hpt | ShL2_02290 | ShL2_02286 | RNA-binding S4 domain-containing heat shock protein. | Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.693 |
| AKC77141.1 | hslO | ShL2_02290 | ShL2_02284 | RNA-binding S4 domain-containing heat shock protein. | Redox regulated Hsp33-like chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress. | 0.810 |
| AKC77141.1 | mazG_2 | ShL2_02290 | ShL2_02291 | RNA-binding S4 domain-containing heat shock protein. | Nucleoside triphosphate pyrophosphohydrolase. | 0.924 |
| AKC77141.1 | mfd | ShL2_02290 | ShL2_02293 | RNA-binding S4 domain-containing heat shock protein. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.872 |
| AKC77141.1 | pth | ShL2_02290 | ShL2_02294 | RNA-binding S4 domain-containing heat shock protein. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.876 |
| AKC77141.1 | tilS | ShL2_02290 | ShL2_02287 | RNA-binding S4 domain-containing heat shock protein. | tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. | 0.693 |
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