STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copA_3P-ATPase superfamily P-type ATPase copper (Cu2+)transporter. (795 aa)    
Predicted Functional Partners:
merP_2
MerTP family mercury (Hg2+) permease, binding protein MerP.
  
 
 0.921
AKC76547.1
Colicin V production protein.
      
 0.836
ycnJ
Copper transport protein YcnJ precursor.
     
 0.809
csoR_2
Copper-sensing transcriptional repressor CsoR.
 
  
 0.803
merP_1
MerTP family mercury (Hg2+) permease, binding protein MerP.
 
 
 0.801
AKC77253.1
Hypothetical protein.
 
  
 0.594
AKC77257.1
Glutaredoxin 3.
   
 
 0.590
truA
tRNA pseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
     
 0.540
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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