STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcaA_2Teicoplanin resistance associated membrane protein TcaA protein. (468 aa)    
Predicted Functional Partners:
AKC77293.1
Hypothetical protein.
  
    0.797
yccS
Inner membrane protein YccS.
  
     0.599
srtA
Sortase A transpeptidase.
      
 0.580
AKC75246.1
Hypothetical protein.
  
  
 0.530
AKC75661.1
Hypothetical protein.
  
     0.528
atl
Bifunctional N-acetylmuramoyl-L-alanine amidase/endo-beta-N-acetylglucosaminidase, Atl.
  
   
 0.520
clfB
Clumping factor B.
      
 0.508
AKC77291.1
Ribosomal-protein-serine N-acetyltransferase.
       0.485
kapB
Kinase associated protein B.
  
     0.476
AKC75561.1
AEC family malonate efflux carrier.
  
     0.475
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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