STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vraDSalX, ABC-type antimicrobial peptide transport system, involved in vancomycin resistance. (252 aa)    
Predicted Functional Partners:
vraE
ABC transporter permease protein, involved in vancomycin resistance.
 0.999
opp-1D_2
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein.
 
    
0.919
AKC76934.1
Permease.
 
 0.907
nsaS
Integral membrane sensor signal transduction histidine kinase.
 
 
 0.873
AKC76910.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
    
0.846
pstB
Phosphate ABC superfamily ATP binding cassette transporter, ABC protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
0.827
opp-3E
ABC superfamily ATP binding cassette transporter, ABC protein.
 
    
0.815
AKC75197.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
 0.801
AKC75413.1
ABC transporter ATP-binding protein.
 
 
    0.801
AKC74951.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
     0.754
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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