STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vraEABC transporter permease protein, involved in vancomycin resistance. (627 aa)    
Predicted Functional Partners:
vraD
SalX, ABC-type antimicrobial peptide transport system, involved in vancomycin resistance.
 0.999
AKC76935.1
Antimicrobial peptide ABC transporter ATPase.
 
 0.963
nsaS
Integral membrane sensor signal transduction histidine kinase.
 
  
 0.875
AKC75196.1
ABC transporter ATP-binding protein.
 
 0.873
graS
Sensor histidine kinase, GraS.
 
  
 0.813
graR
Winged helix family two component transcriptional regulator.
    0.805
AKC75194.1
Winged helix family two component transcriptional regulator.
    0.746
AKC77295.1
Hypothetical protein.
       0.710
AKC77298.1
Hypothetical protein.
       0.682
AKC74978.1
ABC superfamily ATP binding cassette transporter, binding protein.
 
 
 0.639
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.