STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421465_02249Unannotated protein. (269 aa)    
Predicted Functional Partners:
GCA_000421465_01136
Unannotated protein.
 
 0.994
GCA_000421465_02802
Unannotated protein.
   
 0.945
GCA_000421465_00011
Unannotated protein.
    
 0.942
GCA_000421465_00708
Unannotated protein.
  
 0.942
GCA_000421465_02321
Unannotated protein.
   
 0.937
GCA_000421465_01845
Unannotated protein.
 
 
 0.935
GCA_000421465_00542
Unannotated protein.
    
 
 0.921
GCA_000421465_01831
Unannotated protein.
   
 0.912
GCA_000421465_02759
Unannotated protein.
  
    0.910
GCA_000421465_02773
Unannotated protein.
  
    0.890
Your Current Organism:
Methylohalobius crimeensis
NCBI taxonomy Id: 1283300
Other names: M. crimeensis 10Ki, Methylohalobius crimeensis 10Ki, Methylohalobius crimeensis DSM 16011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.