STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421465_02577Unannotated protein. (247 aa)    
Predicted Functional Partners:
GCA_000421465_01527
Unannotated protein.
 0.999
GCA_000421465_01444
Unannotated protein.
   
 0.991
GCA_000421465_01445
Unannotated protein.
 
 0.987
GCA_000421465_03259
Unannotated protein.
   
 0.927
GCA_000421465_01978
Unannotated protein.
   
 0.906
GCA_000421465_02460
Unannotated protein.
  
 0.890
GCA_000421465_02127
Unannotated protein.
 
  
 0.886
GCA_000421465_00209
Unannotated protein.
    
 0.867
GCA_000421465_00640
Unannotated protein.
 
 0.789
GCA_000421465_00327
Unannotated protein.
    
  0.738
Your Current Organism:
Methylohalobius crimeensis
NCBI taxonomy Id: 1283300
Other names: M. crimeensis 10Ki, Methylohalobius crimeensis 10Ki, Methylohalobius crimeensis DSM 16011
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.