STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421465_03004Unannotated protein. (286 aa)    
Predicted Functional Partners:
GCA_000421465_02075
Unannotated protein.
  
 0.901
GCA_000421465_02074
Unannotated protein.
   
 
 0.838
GCA_000421465_03009
Unannotated protein.
  
  0.716
GCA_000421465_03010
Unannotated protein.
  
    0.648
GCA_000421465_01574
Unannotated protein.
  
  
 0.587
GCA_000421465_01383
Unannotated protein.
   
  0.572
GCA_000421465_02079
Unannotated protein.
   
  0.572
GCA_000421465_03005
Unannotated protein.
       0.570
GCA_000421465_03006
Unannotated protein.
       0.570
GCA_000421465_01074
Unannotated protein.
   
 0.529
Your Current Organism:
Methylohalobius crimeensis
NCBI taxonomy Id: 1283300
Other names: M. crimeensis 10Ki, Methylohalobius crimeensis 10Ki, Methylohalobius crimeensis DSM 16011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.