STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421465_03179Unannotated protein. (135 aa)    
Predicted Functional Partners:
GCA_000421465_03190
Unannotated protein.
 
 
 0.993
GCA_000421465_03189
Unannotated protein.
 
  
 0.957
GCA_000421465_01555
Unannotated protein.
  
 
 0.948
GCA_000421465_03295
Unannotated protein.
 
  
 0.844
GCA_000421465_03178
Unannotated protein.
       0.811
GCA_000421465_03177
Unannotated protein.
       0.773
GCA_000421465_03180
Unannotated protein.
       0.766
GCA_000421465_00981
Unannotated protein.
 
  
  0.725
GCA_000421465_00090
Unannotated protein.
 
  
  0.724
GCA_000421465_00089
Unannotated protein.
 
  
  0.716
Your Current Organism:
Methylohalobius crimeensis
NCBI taxonomy Id: 1283300
Other names: M. crimeensis 10Ki, Methylohalobius crimeensis 10Ki, Methylohalobius crimeensis DSM 16011
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