STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_08949Uncharacterized protein. (827 aa)    
Predicted Functional Partners:
S40285_08947
Uncharacterized protein.
 
      0.810
S40285_06680
F-box domain-containing protein.
 
      0.552
S40285_06209
Uncharacterized protein.
  
 
   0.512
S40285_08948
tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]
 
      0.489
S40285_07479
MRC1 domain-containing protein.
  
     0.455
S40285_00698
Uncharacterized protein.
    
  0.426
S40285_01171
Uncharacterized protein.
    
   0.416
S40285_02313
Uncharacterized protein.
    
   0.412
S40285_03709
Ribosomal_L18e/L15P domain-containing protein.
   
   0.411
S40285_00764
Uncharacterized protein.
   
   0.411
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.