STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_07689Uncharacterized protein. (1034 aa)    
Predicted Functional Partners:
S40285_01710
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.907
S40285_00943
Clat_adaptor_s domain-containing protein.
    
 
 0.907
S40285_08300
Uncharacterized protein.
    
 
 0.905
S40285_01296
WD_REPEATS_REGION domain-containing protein.
 
      0.900
S40285_06727
Uncharacterized protein.
 
      0.899
S40285_03549
SGF29 C-terminal domain-containing protein.
    
 
 0.897
S40285_06527
Uncharacterized protein.
    
 
 0.894
S40285_03224
Uncharacterized protein.
   
 
 0.889
S40285_07821
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 
 0.882
S40285_05131
TFIID_20kDa domain-containing protein.
    
 
 0.882
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.