STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_05773Uncharacterized protein. (333 aa)    
Predicted Functional Partners:
S40285_01524
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.990
S40285_00142
Sas10 domain-containing protein.
   
 0.990
S40285_01319
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 0.989
S40285_00928
RRM domain-containing protein.
   
 
 0.988
S40285_04090
Uncharacterized protein.
   
 
 0.988
S40285_01574
Uncharacterized protein.
   
 0.988
S40285_02351
U3 small nucleolar RNA-associated protein 22.
   
 0.985
S40285_02141
Uncharacterized protein.
   
 0.980
S40285_02851
RNA helicase.
   
 0.977
S40285_00593
WD_REPEATS_REGION domain-containing protein.
   
 0.976
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.