STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_02791Uncharacterized protein. (288 aa)    
Predicted Functional Partners:
S40285_08947
Uncharacterized protein.
   
 0.977
S40285_06201
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
   
 0.955
S40285_05537
Uncharacterized protein.
   
 0.948
S40285_00055
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 0.928
S40285_00160
Smr domain-containing protein.
   
 
 0.699
S40285_02790
Uncharacterized protein; Belongs to the synaptobrevin family.
 
  
  0.668
S40285_06707
WD_REPEATS_REGION domain-containing protein; Belongs to the complex I LYR family.
   
  0.665
S40285_04218
Uncharacterized protein.
    
 0.659
S40285_07357
Ipi1_N domain-containing protein.
   
 0.646
S40285_01007
CP-type G domain-containing protein.
   
  0.624
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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