S40285_05980 protein (Stachybotrys chlorohalonata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

S40285_05980

Uncharacterized protein. (416 aa)

Predicted Functional Partners:

S40285_08146

0.989

S40285_04096

0.972

S40285_00342

0.929

S40285_03527

0.916

S40285_02734

0.911

S40285_05126

0.909

S40285_02547

0.909

S40285_00361

0.902

S40285_01342

0.875

S40285_02648

0.838

Your Current Organism:

Stachybotrys chlorohalonata

NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S40285_00342	S40285_01342	A0A084QHM6	A0A084QLK1	Uncharacterized protein.	Choline_kin_N domain-containing protein.	0.766
S40285_00342	S40285_02547	A0A084QHM6	A0A084QVT3	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.999
S40285_00342	S40285_04096	A0A084QHM6	A0A084QV97	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
S40285_00342	S40285_05126	A0A084QHM6	A0A084QSS9	Uncharacterized protein.	HRDC domain-containing protein.	0.971
S40285_00342	S40285_05980	A0A084QHM6	A0A084QBH1	Uncharacterized protein.	Uncharacterized protein.	0.929
S40285_00342	S40285_08146	A0A084QHM6	A0A084QSX2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.702
S40285_00361	S40285_01342	A0A084QHN5	A0A084QLK1	Uncharacterized protein.	Choline_kin_N domain-containing protein.	0.854
S40285_00361	S40285_02547	A0A084QHN5	A0A084QVT3	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.990
S40285_00361	S40285_02734	A0A084QHN5	A0A084QAN0	Uncharacterized protein.	Uncharacterized protein.	0.999
S40285_00361	S40285_04096	A0A084QHN5	A0A084QV97	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.938
S40285_00361	S40285_05126	A0A084QHN5	A0A084QSS9	Uncharacterized protein.	HRDC domain-containing protein.	0.973
S40285_00361	S40285_05980	A0A084QHN5	A0A084QBH1	Uncharacterized protein.	Uncharacterized protein.	0.902
S40285_00361	S40285_08146	A0A084QHN5	A0A084QSX2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.989
S40285_01342	S40285_00342	A0A084QLK1	A0A084QHM6	Choline_kin_N domain-containing protein.	Uncharacterized protein.	0.766
S40285_01342	S40285_00361	A0A084QLK1	A0A084QHN5	Choline_kin_N domain-containing protein.	Uncharacterized protein.	0.854
S40285_01342	S40285_02547	A0A084QLK1	A0A084QVT3	Choline_kin_N domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.806
S40285_01342	S40285_02648	A0A084QLK1	A0A084QXM2	Choline_kin_N domain-containing protein.	Uncharacterized protein.	0.875
S40285_01342	S40285_02734	A0A084QLK1	A0A084QAN0	Choline_kin_N domain-containing protein.	Uncharacterized protein.	0.868
S40285_01342	S40285_03527	A0A084QLK1	A0A084QVI6	Choline_kin_N domain-containing protein.	Uncharacterized protein.	0.891
S40285_01342	S40285_04096	A0A084QLK1	A0A084QV97	Choline_kin_N domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.905

page 1 of 4

Network Stats

number of nodes:

11

number of edges:

20

average node degree:

3.64

avg. local clustering coefficient:

0.738

expected number of edges:

11

PPI enrichment p-value:

0.0104

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016462

Pyrophosphatase activity

4 of 88

1.26

0.62

0.0401

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:7009

FtsK domain, and Tuberculosis

4 of 5

2.5

2.94

2.66e-06

CL:522

Clp, repeat (R) domain, and Clp protease

2 of 5

2.2

0.95

0.0169

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF02861

Clp amino terminal domain, pathogenicity island component

2 of 2

2.6

0.92

0.0215

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR002543

FtsK domain

3 of 3

2.6

1.86

0.00038

IPR041546

ClpA/ClpB, AAA lid domain

2 of 2

2.6

1.02

0.0139

IPR036628

Clp, N-terminal domain superfamily

2 of 2

2.6

1.02

0.0139

IPR018368

ClpA/B, conserved site 1

2 of 2

2.6

1.02

0.0139

IPR004176

Clp, repeat (R) domain

2 of 2

2.6

1.02

0.0139

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM01086

C-terminal, D2-small domain, of ClpB protein

2 of 3

2.42

1.32

0.0036

SM00240

Forkhead associated domain

2 of 7

2.06

1.09

0.0085

SM00382

ATPases associated with a variety of cellular activities

5 of 129

1.19

1.01

0.0012

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