STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_03582Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (439 aa)    
Predicted Functional Partners:
S40285_06737
Ribosomal_L18_c domain-containing protein.
  
 
 0.912
S40285_00500
Uncharacterized protein.
  
 
 0.912
S40285_06995
Uncharacterized protein.
  
 
 0.906
S40285_00459
Ribosomal_L23eN domain-containing protein.
  
 
 0.898
S40285_04454
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
 
      0.895
S40285_02975
KOW domain-containing protein.
  
   0.892
S40285_00366
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.891
S40285_00697
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
   0.853
S40285_08060
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
   0.830
S40285_01097
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
   0.830
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.