S40285_09059 protein (Stachybotrys chlorohalonata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

S40285_09059

Uncharacterized protein. (287 aa)

Predicted Functional Partners:

S40285_01663

0.672

S40285_01631

0.588

S40285_00773

0.542

S40285_02768

0.514

S40285_02292

0.497

S40285_08486

0.400

Your Current Organism:

Stachybotrys chlorohalonata

NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S40285_00773	S40285_01631	A0A084QR83	A0A084QDT2	Dopey_N domain-containing protein.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.601
S40285_00773	S40285_09059	A0A084QR83	A0A084QCA2	Dopey_N domain-containing protein.	Uncharacterized protein.	0.542
S40285_01631	S40285_00773	A0A084QDT2	A0A084QR83	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Dopey_N domain-containing protein.	0.601
S40285_01631	S40285_09059	A0A084QDT2	A0A084QCA2	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Uncharacterized protein.	0.588
S40285_01663	S40285_09059	A0A084QE00	A0A084QCA2	Uncharacterized protein.	Uncharacterized protein.	0.672
S40285_02292	S40285_09059	A0A084QSG6	A0A084QCA2	acidPPc domain-containing protein.	Uncharacterized protein.	0.497
S40285_02768	S40285_09059	A0A084QAG4	A0A084QCA2	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	Uncharacterized protein.	0.514
S40285_08486	S40285_09059	A0A084QLM3	A0A084QCA2	PUM-HD domain-containing protein.	Uncharacterized protein.	0.400
S40285_09059	S40285_00773	A0A084QCA2	A0A084QR83	Uncharacterized protein.	Dopey_N domain-containing protein.	0.542
S40285_09059	S40285_01631	A0A084QCA2	A0A084QDT2	Uncharacterized protein.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.588
S40285_09059	S40285_01663	A0A084QCA2	A0A084QE00	Uncharacterized protein.	Uncharacterized protein.	0.672
S40285_09059	S40285_02292	A0A084QCA2	A0A084QSG6	Uncharacterized protein.	acidPPc domain-containing protein.	0.497
S40285_09059	S40285_02768	A0A084QCA2	A0A084QAG4	Uncharacterized protein.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.514
S40285_09059	S40285_08486	A0A084QCA2	A0A084QLM3	Uncharacterized protein.	PUM-HD domain-containing protein.	0.400