STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_03813Zn(2)-C6 fungal-type domain-containing protein. (605 aa)    
Predicted Functional Partners:
S40285_04855
Uncharacterized protein.
   
  0.655
S40285_04854
Uncharacterized protein.
   
  0.655
S40285_03211
Uncharacterized protein.
   
  0.655
S40285_01262
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.606
S40285_00646
Uncharacterized protein.
    
 0.601
S40285_06898
Uncharacterized protein.
    
 0.597
S40285_04209
ERCC4 domain-containing protein.
    
 0.585
S40285_00843
MPN domain-containing protein.
    
  0.578
S40285_01030
ERCC4 domain-containing protein.
   
 0.543
S40285_03469
Ribonuclease P protein subunit.
   
  0.540
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.