STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_00380Uncharacterized protein. (346 aa)    
Predicted Functional Partners:
S40285_04806
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
   
 0.993
S40285_00020
Uncharacterized protein.
   
 0.993
S40285_02328
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 0.988
S40285_02997
WD_REPEATS_REGION domain-containing protein.
   
 
 0.984
S40285_08032
DNA helicase; Belongs to the MCM family.
   
 0.973
S40285_07690
DNA_pol_E_B domain-containing protein.
   
 0.970
S40285_02149
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.968
S40285_08353
DNA helicase; Belongs to the MCM family.
   
 0.964
S40285_00610
DNA helicase; Belongs to the MCM family.
   
 0.962
S40285_05837
AAA domain-containing protein.
   
 0.960
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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