STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_03138HTH APSES-type domain-containing protein. (435 aa)    
Predicted Functional Partners:
S40285_02852
SUN domain-containing protein.
    
 
 0.888
S40285_00713
Uncharacterized protein.
   
 
 0.887
S40285_04535
ARID domain-containing protein.
   
 
 0.796
S40285_02665
Uncharacterized protein.
   
 
 0.796
S40285_02071
Uncharacterized protein.
   
 
 0.778
S40285_08962
Uncharacterized protein.
  
 
 0.664
S40285_09003
Uncharacterized protein.
   
 
 0.570
S40285_01691
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.560
S40285_04134
Uncharacterized protein.
     
 0.543
S40285_07910
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
    
 0.541
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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