STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_00870Uncharacterized protein. (1160 aa)    
Predicted Functional Partners:
S40285_01620
Peptidase S59 domain-containing protein.
    
 0.990
S40285_01305
Uncharacterized protein.
  
 0.987
S40285_06143
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
  
 0.985
S40285_07310
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.982
S40285_00152
Nup188_C domain-containing protein.
  
 0.954
S40285_01349
Nup54 domain-containing protein.
    
 0.923
S40285_00721
Uncharacterized protein.
    
 
 0.902
S40285_02624
Uncharacterized protein.
    
 0.887
S40285_00871
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
 
  
   0.877
S40285_00172
Uncharacterized protein.
   
 0.872
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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