STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_04587TYR_PHOSPHATASE_2 domain-containing protein. (631 aa)    
Predicted Functional Partners:
S40285_07234
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.952
S40285_04670
mRNA_triPase domain-containing protein.
    
 0.946
S40285_04650
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.894
S40285_04823
mRNA cap guanine-N7 methyltransferase.
   
 0.801
S40285_02607
RPOLD domain-containing protein.
   
 0.790
S40285_00841
Uncharacterized protein.
    
  0.782
S40285_01036
RPOL4c domain-containing protein.
    
  0.777
S40285_00722
RPOLD domain-containing protein.
    
  0.763
S40285_03280
Uncharacterized protein.
    
  0.761
S40285_00200
Nuclear cap-binding protein subunit 2.
   
 
 0.744
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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