STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_09343DRMBL domain-containing protein. (538 aa)    
Predicted Functional Partners:
S40285_00873
YTH domain-containing protein.
    
 0.998
S40285_08878
CPSF_A domain-containing protein.
   
 0.935
S40285_05826
SAP domain-containing protein.
   
 0.928
S40285_00691
DUF3453 domain-containing protein.
   
 0.925
S40285_00416
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.903
S40285_05042
BTB domain-containing protein.
    
 0.874
S40285_07845
Ku domain-containing protein.
    
 0.851
S40285_07846
VWFA domain-containing protein.
    
 0.851
S40285_06461
CID domain-containing protein.
    
 0.849
S40285_04590
DNA ligase.
   
 0.847
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.