STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_08470S4 RNA-binding domain-containing protein. (183 aa)    
Predicted Functional Partners:
S40285_04713
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
  0.999
S40285_06242
Brix domain-containing protein.
   
 0.999
S40285_01524
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.998
S40285_01496
Uncharacterized protein.
   
 0.998
S40285_00142
Sas10 domain-containing protein.
   
  0.998
S40285_02141
Uncharacterized protein.
   
  0.997
S40285_04972
Utp12 domain-containing protein.
   
  0.996
S40285_04843
Nop domain-containing protein.
   
 0.995
S40285_07433
WD_REPEATS_REGION domain-containing protein.
   
 0.995
S40285_00948
Bms1-type G domain-containing protein.
   
 0.995
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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