STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_08190CBM1 domain-containing protein. (380 aa)    
Predicted Functional Partners:
S40285_08872
Beta-xylanase.
 
    
0.872
S40285_02867
Beta-xylanase.
 
    
 0.859
S40285_07424
Beta-xylanase.
 
    
 0.781
S40285_05002
Beta-xylanase.
 
    
0.544
S40285_05448
Uncharacterized protein; Belongs to the glycosyl hydrolase 43 family.
 
     
0.479
S40285_08079
Guanylate kinase-like domain-containing protein.
    
  0.444
S40285_01299
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.434
S40285_00438
Ribosomal_S10 domain-containing protein.
   
   0.429
S40285_07822
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.426
S40285_04732
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
    
   0.426
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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