STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_09310Uncharacterized protein. (267 aa)    
Predicted Functional Partners:
S40285_07647
t-SNARE coiled-coil homology domain-containing protein.
   
 0.964
S40285_06994
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.953
S40285_00781
GRASP55_65 domain-containing protein.
    
 0.871
S40285_03000
Uncharacterized protein.
    
 0.780
S40285_06986
GOLD domain-containing protein.
    
  0.713
S40285_06103
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.674
S40285_02790
Uncharacterized protein; Belongs to the synaptobrevin family.
     
 0.645
S40285_03573
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.645
S40285_01725
Uncharacterized protein.
    
 0.645
S40285_08705
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
     
 0.643
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.