STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_02446ANK_REP_REGION domain-containing protein. (642 aa)    
Predicted Functional Partners:
S40285_00161
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 
 0.923
S40285_01518
Uncharacterized protein.
   
 
 0.894
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
    
   0.852
S40285_01427
Uncharacterized protein.
 
 
    0.796
S40285_03459
AAA domain-containing protein.
    
 
 0.675
S40285_05137
Uncharacterized protein.
    
 
 0.675
S40285_04615
AAA domain-containing protein.
    
 
 0.675
S40285_04683
AAA domain-containing protein.
    
 
 0.675
S40285_07077
U-box domain-containing protein.
    
 
 0.673
S40285_05548
Uncharacterized protein.
   
 
 0.658
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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