STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_02427SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (319 aa)    
Predicted Functional Partners:
S40285_04547
Uncharacterized protein.
  
 
 0.943
S40285_02976
Uncharacterized protein.
  
 
 0.924
S40285_01211
zf-Mss51 domain-containing protein.
    
 
 0.810
S40285_06411
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
  
 
 0.808
S40285_01473
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.783
S40285_08376
Rieske domain-containing protein.
    
 0.781
S40285_00658
Cytochrome c domain-containing protein.
    
 0.754
S40285_07021
UDPG_MGDP_dh_C domain-containing protein.
 
      0.748
S40285_09927
Uncharacterized protein.
  
 
 0.745
S40285_03615
Uncharacterized protein.
  
 
 0.723
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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