STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S40285_02416APH domain-containing protein. (179 aa)    
Predicted Functional Partners:
S40285_04529
Ribosomal_L6 domain-containing protein; Belongs to the universal ribosomal protein uL6 family.
    
  0.860
S40285_04792
Ribosomal_S7 domain-containing protein.
   
 
 0.845
S40285_01755
37S ribosomal protein S25, mitochondrial.
   
 
 0.840
S40285_07822
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.839
S40285_02195
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.838
S40285_04820
Uncharacterized protein.
   
   0.832
S40285_02313
Uncharacterized protein.
   
 
 0.832
S40285_01318
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.826
S40285_03152
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.825
S40285_06354
BZIP domain-containing protein.
    
 0.824
Your Current Organism:
Stachybotrys chlorohalonata
NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.