STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBF1Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1. (1802 aa)    
Predicted Functional Partners:
RAB1A
Ras-related protein Rab-1A.
    
 0.943
COPG1
Coatomer subunit gamma-1.
   
 0.862
COPG2
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.862
USO1
General vesicular transport factor p115.
   
 0.858
ARFGAP1
ADP-ribosylation factor GTPase-activating protein 1.
    
 0.850
COPB1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.793
ARF4
ADP-ribosylation factor 4; Belongs to the small GTPase superfamily. Arf family.
    
 0.792
ARL6
ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.792
ARF5
ADP-ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family.
    
 0.792
ARL5A
ADP-ribosylation factor-like 5A; Belongs to the small GTPase superfamily. Arf family.
    
 0.765
Your Current Organism:
Nipponia nippon
NCBI taxonomy Id: 128390
Other names: Ibis nippon, N. nippon, crested ibis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.