STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FDX12Fe-2S ferredoxin-type domain-containing protein. (123 aa)    
Predicted Functional Partners:
ISCU
NifU_N domain-containing protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
 
 0.904
NFS1
Aminotran_5 domain-containing protein.
 
 0.897
FADS6
Fatty acid desaturase 6.
    
 0.892
FDXR
Pyr_redox_2 domain-containing protein.
    
 0.892
Y956_13720
4Fe-4S ferredoxin-type domain-containing protein.
  
 
 0.860
Y956_15902
Cholesterol desaturase daf-36.
  
 
 0.851
NDUFS2
Uncharacterized protein.
  
 
 0.846
SCLY
Selenocysteine lyase.
  
 0.804
NDUFS3
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
  
 
 0.797
NDUFV1
NADH_4Fe-4S domain-containing protein.
  
 
 0.787
Your Current Organism:
Nipponia nippon
NCBI taxonomy Id: 128390
Other names: Ibis nippon, N. nippon, crested ibis
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