Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Y956_08720Short stature homeobox protein 2. (70 aa)    
Predicted Functional Partners:
FOXB1
Forkhead box protein B1.
   
  
 0.723
SOX5
Transcription factor SOX-5.
    
 
 0.676
BANP
Protein BANP.
      
 0.655
PKNOX1
Homeobox protein PKNOX1.
    
 
 0.618
GHITM
Growth hormone-inducible transmembrane protein; Belongs to the BI1 family.
      
 0.569
ORAI1
Calcium release-activated calcium channel protein 1.
      
 0.547
MRE11A
Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.
      
 0.546
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 
 0.545
TBX18
T-box transcription factor TBX18.
   
 0.541
TBX15
T-box transcription factor TBX15.
   
 0.538
Your Current Organism:
Nipponia nippon
NCBI taxonomy Id: 128390
Other names: Ibis nippon, N. nippon, crested ibis
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