STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y956_08720Short stature homeobox protein 2. (70 aa)    
Predicted Functional Partners:
RSRC1
Serine/Arginine-related protein 53.
      
 0.493
BANP
Protein BANP.
    
 
 0.487
Y956_13708
Acetylserotonin O-methyltransferase.
      
 0.487
Y956_07651
Iroquois-class homeodomain protein IRX-6.
   
 
 0.461
TBX18
T-box transcription factor TBX18.
   
 
 0.423
LDB1
LIM domain-binding protein 1.
    
 0.419
Y956_10563
LIM domain-binding protein 2.
    
 0.419
TBX15
T-box transcription factor TBX15.
   
 
 0.412
NR4A3
Nuclear receptor subfamily 4 group A member 3.
      
 0.408
Your Current Organism:
Nipponia nippon
NCBI taxonomy Id: 128390
Other names: Ibis nippon, N. nippon, crested ibis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.