rlmH protein (Staphylococcus hyicus) - STRING interaction network

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Your Current Organism:

Staphylococcus hyicus

NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC94869.1	gltB	SHYC_00190	SHYC_11410	Metallo-beta-lactamase family protein YycJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
AJC94869.1	rlmH	SHYC_00190	SHYC_00210	Metallo-beta-lactamase family protein YycJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	0.598
dus	gltB	SHYC_11160	SHYC_11410	tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.434
dus	rlmH	SHYC_11160	SHYC_00210	tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	0.488
dus	rsmB	SHYC_11160	SHYC_08345	tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.436
gltB	AJC94869.1	SHYC_11410	SHYC_00190	Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metallo-beta-lactamase family protein YycJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
gltB	dus	SHYC_11410	SHYC_11160	Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.434
gltB	nadD	SHYC_11410	SHYC_06580	Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	0.407
gltB	rlmH	SHYC_11410	SHYC_00210	Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	0.478
gltB	rsmB	SHYC_11410	SHYC_08345	Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.554
hsdR	rlmH	SHYC_00240	SHYC_00210	Type I restriction-modification system endonuclease HsdR; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	0.451
nadD	gltB	SHYC_06580	SHYC_11410	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
nadD	rlmH	SHYC_06580	SHYC_00210	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	0.515
nadD	rsfS	SHYC_06580	SHYC_06590	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.959
rlmH	AJC94869.1	SHYC_00210	SHYC_00190	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	Metallo-beta-lactamase family protein YycJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
rlmH	dus	SHYC_00210	SHYC_11160	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.488
rlmH	gltB	SHYC_00210	SHYC_11410	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.478
rlmH	hsdR	SHYC_00210	SHYC_00240	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	Type I restriction-modification system endonuclease HsdR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.451
rlmH	nadD	SHYC_00210	SHYC_06580	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	0.515
rlmH	rsfS	SHYC_00210	SHYC_06590	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.772

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