Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC94988.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)    
Predicted Functional Partners:
AJC94987.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.924
feoA
FeoA domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.750
AJC95198.1
CobW/HypB/UreG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.556
AJC94986.1
Tributyrin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.486
AJC94984.1
Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.462
AJC94985.1
Glycine betaine/carnitine/choline transport system permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.462
AJC94982.1
Putative glycine betaine/carnitine/choline transport ATP-binding protein.
       0.436
AJC94983.1
Glycine betaine/carnitine/choline ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.436
secDF
Preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
      
 0.403
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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