Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJC94989.1 | arcA | SHYC_00840 | SHYC_00860 | Crp/Fnr family transcriptional regulator. | Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.751 |
| AJC94989.1 | arcB-1 | SHYC_00840 | SHYC_00855 | Crp/Fnr family transcriptional regulator. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.653 |
| AJC94989.1 | arcC | SHYC_00840 | SHYC_00845 | Crp/Fnr family transcriptional regulator. | Carbamate kinase; Catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.887 |
| AJC94989.1 | arcD | SHYC_00840 | SHYC_00850 | Crp/Fnr family transcriptional regulator. | Putative arginine/ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.886 |
| arcA | AJC94989.1 | SHYC_00860 | SHYC_00840 | Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Crp/Fnr family transcriptional regulator. | 0.751 |
| arcA | arcB-1 | SHYC_00860 | SHYC_00855 | Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.994 |
| arcA | arcC | SHYC_00860 | SHYC_00845 | Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbamate kinase; Catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.975 |
| arcA | arcD | SHYC_00860 | SHYC_00850 | Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Putative arginine/ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.920 |
| arcB-1 | AJC94989.1 | SHYC_00855 | SHYC_00840 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Crp/Fnr family transcriptional regulator. | 0.653 |
| arcB-1 | arcA | SHYC_00855 | SHYC_00860 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| arcB-1 | arcC | SHYC_00855 | SHYC_00845 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamate kinase; Catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| arcB-1 | arcD | SHYC_00855 | SHYC_00850 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Putative arginine/ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.718 |
| arcC | AJC94989.1 | SHYC_00845 | SHYC_00840 | Carbamate kinase; Catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Crp/Fnr family transcriptional regulator. | 0.887 |
| arcC | arcA | SHYC_00845 | SHYC_00860 | Carbamate kinase; Catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.975 |
| arcC | arcB-1 | SHYC_00845 | SHYC_00855 | Carbamate kinase; Catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.994 |
| arcC | arcD | SHYC_00845 | SHYC_00850 | Carbamate kinase; Catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Putative arginine/ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.936 |
| arcD | AJC94989.1 | SHYC_00850 | SHYC_00840 | Putative arginine/ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Crp/Fnr family transcriptional regulator. | 0.886 |
| arcD | arcA | SHYC_00850 | SHYC_00860 | Putative arginine/ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.920 |
| arcD | arcB-1 | SHYC_00850 | SHYC_00855 | Putative arginine/ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.718 |
| arcD | arcC | SHYC_00850 | SHYC_00845 | Putative arginine/ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbamate kinase; Catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.936 |
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